BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007C11LP1|AL425673
(791 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1801 1554 0.0
>3x_Contig1801
Length = 57606
Score = 1554 bits (782), Expect = 0.0
Identities = 787/791 (99%)
Strand = Plus / Plus
Query: 1 atctcatctcatggatgtnaagaataaagaaaggtttgttgctactctcgataaaccagc 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 5242 atctcatctcatggatgtaaagaataaagaaaggtttgttgctactctcgataaaccagc 5301
Query: 61 gaacattgggctatgccaatcgaattagatactgatggtgctacaaccaaggctctacga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5302 gaacattgggctatgccaatcgaattagatactgatggtgctacaaccaaggctctacga 5361
Query: 121 gctttgacgaaacaatgtgaagtggatcccaagttagctaacgataccagcatccatttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5362 gctttgacgaaacaatgtgaagtggatcccaagttagctaacgataccagcatccatttg 5421
Query: 181 atcatcaatacacaacaacctgttggaataagaaacgaccacgtcccccgcatcattcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5422 atcatcaatacacaacaacctgttggaataagaaacgaccacgtcccccgcatcattcct 5481
Query: 241 ttgaaacacagccagatgaaatctgcaaatgatgtgcgaattctactgatctgtaaggac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5482 ttgaaacacagccagatgaaatctgcaaatgatgtgcgaattctactgatctgtaaggac 5541
Query: 301 ccaagtacgctatatcgagattcgttgacgaaggaaaaggctacggcagaattattcaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5542 ccaagtacgctatatcgagattcgttgacgaaggaaaaggctacggcagaattattcaaa 5601
Query: 361 gaaattatcagcgtcaagaaactgaagcaacggttcagaggtaaaaaactgaaagagtta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5602 gaaattatcagcgtcaagaaactgaagcaacggttcagaggtaaaaaactgaaagagtta 5661
Query: 421 tataatgaatttgacatgatagtagcggattacagagttcaccatttattaccaagtgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5662 tataatgaatttgacatgatagtagcggattacagagttcaccatttattaccaagtgtc 5721
Query: 481 ctgggctcaactttctaccgttcgaatagaaagctgccgtttgttgtwagaatgtcaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 5722 ctgggctcaactttctaccgttcgaatagaaagctgccgtttgttgtaagaatgtcaaaa 5781
Query: 541 caaattaaagagaaaggttccaaaatgaaggaagattgtgacccaaaatacgtgaaagca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5782 caaattaaagagaaaggttccaaaatgaaggaagattgtgacccaaaatacgtgaaagca 5841
Query: 601 caagtaaagtccatatgtwagaatacctggtttctaccaaacaaagacaactgtttaagc 660
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 5842 caagtaaagtccatatgtaagaatacctggtttctaccaaacaaagacaactgtttaagc 5901
Query: 661 attaaaattggggaaatcggcgtacatgctgaggcggaattaatggcgaatgcagaagat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5902 attaaaattggggaaatcggcgtacatgctgaggcggaattaatggcgaatgcagaagat 5961
Query: 721 gtgatagactttctgtgtkacagatcaaaaaagccacaaggtgggtgcatcaaagatggg 780
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 5962 gtgatagactttctgtgtgacagatcaaaaaagccacaaggtgggtgcatcaaagatggg 6021
Query: 781 aaaatctcctc 791
|||||||||||
Sbjct: 6022 aaaatctcctc 6032
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5916
Number of Sequences: 1807
Number of extensions: 5916
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 791
length of database: 10,358,551
effective HSP length: 16
effective length of query: 775
effective length of database: 10,329,639
effective search space: 8005470225
effective search space used: 8005470225
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)